Sample: MMETSP1381

Sample Name MMETSP1381 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)

Pavlova sp. CCMP459

Sample Accession CAM_SMPL_003160
Combined Assembly Pavlova-sp-CCMP459
Taxon ID 298111

Ph 8.1  
Phosphate 36.2  
Nitrate 882  
Axenic 1  
Trace elements 12794  
Experimental salinity 34  

Growth medium f/2 amended seawater  
Modifications to growth medium f/2 nutrients, no silica  

NCBI SRA SRS621393  

Project id 104  
Clonal 1  
Date of experiment 27-NOV-12  
External sample id CCMP 459 +UV 23h  
Investigation type EU  
Principle investigator Sheri Floge  
Other experimental metadata available Sample following 2min of UV-C (254nm) irradiation preceding cell population decline at approximately 12hours post-irradiation.  

GenBank BioSample 2740604  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP138/MMETSP1381.fastq.tar  

Day portion of day night cycle in hours 16  
Light 200  
Experimental temperature 16  
Night portion of day night cycle in hours 8  

Library acc CAM_LIB_001906  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000878  
Combined assembly name Pavlova-sp-CCMP459  
Pcr amp No  

Source mat id (MMETSP1381) Pavlova sp.  
Source mat id CAM_BM_003180  
Source mat id CAM_SMPL_003160  
Sample type eukaryotes  
Sample description Pavlova sp. CCMP459  
Sample name MMETSP1381  
Taxon id 298111  

Strain CCMP459  
Genus Pavlova  
Species sp.  
Family Pavlovaceae  
Order Pavlovales  
Superkingdom Eukaryota  
Class Pavlovophyceae  
Phylum Haptophyta